Tag: molecular simulation
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Fovus Delivers OpenMM Molecular Dynamics Simulations for as Low as $6.59/µs, as fast as 3359 ns/day
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OpenMM is a high-performance toolkit for molecular simulations that is widely used in research domains such as computational chemistry, structural biology, and drug discovery. Known for its flexibility, GPU acceleration, and Python interface, OpenMM makes it easy to prototype new simulation methods or run standard molecular dynamics (MD) simulations at scale. However, despite its strengths,…
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Unlocking New Heights in Computational Drug Discovery: How Fovus Empowered a Series B Biotech Startup to Scale Faster by 96x and Reduce Costs by 5.5x
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A stealth Series B biotech startup focused on developing innovative therapies faced significant challenges in managing its cloud-based high-performance computing (HPC) workflows. The company’s computational workloads included high-throughput virtual screening (HTVS), molecular docking, molecular dynamics simulations, and AI-augmented HTVS; each requiring immense computational power. However, managing cloud infrastructure, optimizing HPC strategies, and scaling clusters created…
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Run Molecular Dynamics Simulations in the Cloud as Fast as 1139 ns/day, as Cost-effective as $29/μs: Benchmarking GROMACS on Fovus
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GROMACS has revolutionized molecular dynamics (MD) simulations by empowering researchers to simulate molecular interactions across biology, chemistry, and materials science, driving advancements in protein folding, drug discovery, material design, and nanotechnology. However, running GROMACS on cloud GPUs presents significant scalability and cost challenges. GPUs are among the most in-demand resources in the cloud, making them difficult…